Gene detail information of Glyur000123s00008429.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55370.27.00E-39OBF-binding protein 3
NRXP_004505871.13.64E-112PREDICTED: dof zinc finger protein DOF3.6-like [Cicer arietinum]
Swissprottr|Q9M2U1|DOF36_ARATH5.00E-51Dof zinc finger protein DOF3.6
trEMBLtr|K7LTC4|K7LTC4_SOYBN4.00E-105Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G06880.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00123155546156786-


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000123s00008429.1PF02701.10zf-Dof781381.80E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.345
SRR1783600control21.637
SRR1783602moderate drought stress22.538
SRR1811619moderate drought stress22.571

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.311
DRR006520Root Summer glycyrrhizin high producing strain13.366
DRR006521Root Winter glycyrrhizin high producing strain1.091
DRR006522Root Winter glycyrrhizin high producing strain1.201
DRR006523Root Summer glycyrrhizin low producing strain19.329
DRR006524Root Summer glycyrrhizin low producing strain19.724
DRR006525Leaf Summer glycyrrhizin high producing strain7.012
DRR006526Leaf Summer glycyrrhizin high producing strain7.478

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.235
SRR2868004Drought Stress(Tissue:root)20.480
SRR2967015Control (Tissue:root)25.182

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.695
SRR9715740Leave8.356
SRR9715741Leave12.685
SRR9715739Root8.108
SRR9715742Root35.842
SRR9715743Root28.957

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.226
SRR8749028MeJA induced 9h3.132
SRR8749029MeJA induced 9h1.804
SRR8749030Uninduced0.730
SRR8749031Uninduced0.133
SRR8749032Uninduced0.082

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.133
SRR8400027Control-Root9.969

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved