Gene detail information of Glyur000124s00011933.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G11520.18.00E-146calmodulin-binding receptor-like cytoplasmic kinase 3
NRXP_004508448.10PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3-like [Cicer arietinum]
COGYP_004092358.11.00E-28serine/threonine protein kinase with PASTA sensor(s) [Ethanoligenens harbinense YUAN-3]
Swissprottr|Q9ASQ5|CRCK3_ARATH0Calmodulin-binding receptor-like cytoplasmic kinase 3 (Precursor)
trEMBLtr|G7JFF3|G7JFF3_MEDTR0Calmodulin-binding receptor-like cytoplasmic kinase {ECO:0000313|EMBL:AES91629.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00124999914245-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000124s00011933.1PF07714.12Pkinase_Tyr2224893.00E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.006
SRR1783600control26.105
SRR1783602moderate drought stress28.874
SRR1811619moderate drought stress28.532

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.635
DRR006520Root Summer glycyrrhizin high producing strain35.046
DRR006521Root Winter glycyrrhizin high producing strain77.019
DRR006522Root Winter glycyrrhizin high producing strain74.577
DRR006523Root Summer glycyrrhizin low producing strain47.660
DRR006524Root Summer glycyrrhizin low producing strain47.837
DRR006525Leaf Summer glycyrrhizin high producing strain14.637
DRR006526Leaf Summer glycyrrhizin high producing strain14.497

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.068
SRR2868004Drought Stress(Tissue:root)55.855
SRR2967015Control (Tissue:root)55.792

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.415
SRR9715740Leave25.741
SRR9715741Leave39.722
SRR9715739Root11.630
SRR9715742Root39.065
SRR9715743Root37.038

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.054
SRR8749028MeJA induced 9h36.907
SRR8749029MeJA induced 9h46.945
SRR8749030Uninduced63.174
SRR8749031Uninduced72.288
SRR8749032Uninduced54.192

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.146
SRR8400027Control-Root40.994

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved