Gene detail information of Glyur000124s00011937.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20280.10sucrose phosphate synthase 1F
NRXP_003549735.10PREDICTED: probable sucrose-phosphate synthase-like [Glycine max]
COGYP_003529338.13.00E-132sucrose-phosphate synthase [Nitrosococcus halophilus Nc 4]
Swissprottr|Q43876|SPSA_VICFA0Probable sucrose-phosphate synthase
trEMBLtr|I1MU40|I1MU40_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G11820.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001243415441833+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00696E2.4.1.14 EC:2.4.1.14 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005985  sucrose metabolic process

GO:0009058  biosynthetic process


molecular_function

GO:0046524  sucrose-phosphate synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000124s00011937.1PF13579.1Glyco_trans_4_41913911.10E-06
Glyur000124s00011937.1PF00534.15Glycos_transf_14706467.90E-27
Glyur000124s00011937.1PF05116.8S6PP79110048.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.159
SRR1783600control34.435
SRR1783602moderate drought stress37.948
SRR1811619moderate drought stress37.872

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain36.211
DRR006520Root Summer glycyrrhizin high producing strain35.942
DRR006521Root Winter glycyrrhizin high producing strain48.075
DRR006522Root Winter glycyrrhizin high producing strain46.867
DRR006523Root Summer glycyrrhizin low producing strain30.503
DRR006524Root Summer glycyrrhizin low producing strain29.554
DRR006525Leaf Summer glycyrrhizin high producing strain24.140
DRR006526Leaf Summer glycyrrhizin high producing strain23.816

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.947
SRR2868004Drought Stress(Tissue:root)50.313
SRR2967015Control (Tissue:root)42.606

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.332
SRR9715740Leave26.180
SRR9715741Leave29.376
SRR9715739Root22.887
SRR9715742Root46.047
SRR9715743Root39.056

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.800
SRR8749028MeJA induced 9h14.742
SRR8749029MeJA induced 9h9.004
SRR8749030Uninduced6.030
SRR8749031Uninduced3.313
SRR8749032Uninduced3.434

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.866
SRR8400027Control-Root49.074

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved