Gene detail information of Glyur000124s00011963.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15080.15.00E-143Protein kinase superfamily protein
NRXP_006593327.10PREDICTED: protein kinase isoform X1 [Glycine max]
COGYP_005517714.18.00E-25serine/threonine protein kinase with PASTA sensor(s) [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprottr|Q9LFP7|Y5158_ARATH4.00E-175Probable receptor-like protein kinase At5g15080
trEMBLtr|I1LZQ4|I1LZQ4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G22790.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00124205815209910+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000124s00011963.1PF07714.12Pkinase_Tyr1213965.20E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.954
SRR1783600control35.152
SRR1783602moderate drought stress39.527
SRR1811619moderate drought stress39.374

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.136
DRR006520Root Summer glycyrrhizin high producing strain41.905
DRR006521Root Winter glycyrrhizin high producing strain8.209
DRR006522Root Winter glycyrrhizin high producing strain7.923
DRR006523Root Summer glycyrrhizin low producing strain39.506
DRR006524Root Summer glycyrrhizin low producing strain39.314
DRR006525Leaf Summer glycyrrhizin high producing strain15.524
DRR006526Leaf Summer glycyrrhizin high producing strain15.589

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.621
SRR2868004Drought Stress(Tissue:root)27.652
SRR2967015Control (Tissue:root)34.150

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.939
SRR9715740Leave18.430
SRR9715741Leave17.720
SRR9715739Root13.171
SRR9715742Root27.223
SRR9715743Root24.702

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.831
SRR8749028MeJA induced 9h1.706
SRR8749029MeJA induced 9h2.416
SRR8749030Uninduced0.272
SRR8749031Uninduced0.308
SRR8749032Uninduced0.466

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.110
SRR8400027Control-Root51.631

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved