Gene detail information of Glyur000124s00011965.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G51950.1 | 2.00E-08 | indole-3-acetic acid inducible 18 |
| NR | XP_007155038.1 | 6.75E-42 | hypothetical protein PHAVU_003G167700g [Phaseolus vulgaris] |
| Swissprot | tr|P0C128|IAA25_ORYSJ | 8.00E-13 | Auxin-responsive protein IAA25 |
| trEMBL | tr|V7CA22|V7CA22_PHAVU | 3.00E-42 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00124 | 251711 | 252827 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000124s00011965.1 | PF02309.11 | AUX_IAA | 14 | 181 | 3.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.213 |
| SRR1783600 | control | 0.306 |
| SRR1783602 | moderate drought stress | 0.568 |
| SRR1811619 | moderate drought stress | 0.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.430 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.270 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.553 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.455 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.340 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.995 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.653 |
| SRR2967015 | Control (Tissue:root) | 1.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.275 |
| SRR9715740 | Leave | 4.027 |
| SRR9715741 | Leave | 1.772 |
| SRR9715739 | Root | 0.440 |
| SRR9715742 | Root | 1.167 |
| SRR9715743 | Root | 0.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.153 |
| SRR8749028 | MeJA induced 9h | 85.487 |
| SRR8749029 | MeJA induced 9h | 75.187 |
| SRR8749030 | Uninduced | 6.173 |
| SRR8749031 | Uninduced | 3.164 |
| SRR8749032 | Uninduced | 9.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.363 |
| SRR8400027 | Control-Root | 0.386 |