Gene detail information of Glyur000124s00011966.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G13290.25.00E-145beta-1,4-N-acetylglucosaminyltransferase family protein
NRXP_003542632.10PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [Glycine max]
COGYP_004985011.13.00E-15glycosyl transferase group 1 (modular protein), partial [Azospirillum brasilense Sp245]
trEMBLtr|I1LZQ1|I1LZQ1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G22730.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00124259043260131+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT17


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00737MGAT3 EC:2.4.1.144 N-Glycan biosynthesis map00510


Gene Ontology

biological_process

GO:0006487  protein N-linked glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0003830  beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000124s00011966.1PF04724.8Glyco_transf_1783601.20E-157


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.293
SRR1783600control10.647
SRR1783602moderate drought stress8.565
SRR1811619moderate drought stress8.672

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.099
DRR006520Root Summer glycyrrhizin high producing strain8.015
DRR006521Root Winter glycyrrhizin high producing strain5.472
DRR006522Root Winter glycyrrhizin high producing strain5.925
DRR006523Root Summer glycyrrhizin low producing strain8.858
DRR006524Root Summer glycyrrhizin low producing strain9.289
DRR006525Leaf Summer glycyrrhizin high producing strain7.444
DRR006526Leaf Summer glycyrrhizin high producing strain7.926

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.052
SRR2868004Drought Stress(Tissue:root)8.706
SRR2967015Control (Tissue:root)8.439

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.314
SRR9715740Leave22.945
SRR9715741Leave19.161
SRR9715739Root9.030
SRR9715742Root10.304
SRR9715743Root8.491

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.605
SRR8749028MeJA induced 9h1.908
SRR8749029MeJA induced 9h1.371
SRR8749030Uninduced1.500
SRR8749031Uninduced0.118
SRR8749032Uninduced0.339

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.066
SRR8400027Control-Root14.840

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved