Gene detail information of Glyur000124s00011968.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G42160.12.00E-133zinc finger (ubiquitin-hydrolase) domain-containing protein
NRAES91573.20zinc finger (ubiquitin-hydrolase) domain protein [Medicago truncatula]
trEMBLtr|G7JE65|G7JE65_MEDTR0Zinc finger (Ubiquitin-hydrolase) domain protein {ECO:0000313|EMBL:AES91573.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00124293373297712-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10632BRAP EC:2.3.2.27 Ras signaling pathway map04014


Gene Ontology

molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000124s00011968.1PF07576.7BRAP2551614.50E-28
Glyur000124s00011968.1PF02148.14zf-UBP2052799.30E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.570
SRR1783600control15.595
SRR1783602moderate drought stress14.710
SRR1811619moderate drought stress14.654

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.873
DRR006520Root Summer glycyrrhizin high producing strain14.954
DRR006521Root Winter glycyrrhizin high producing strain9.085
DRR006522Root Winter glycyrrhizin high producing strain9.100
DRR006523Root Summer glycyrrhizin low producing strain13.609
DRR006524Root Summer glycyrrhizin low producing strain13.849
DRR006525Leaf Summer glycyrrhizin high producing strain6.551
DRR006526Leaf Summer glycyrrhizin high producing strain6.358

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.836
SRR2868004Drought Stress(Tissue:root)14.893
SRR2967015Control (Tissue:root)14.837

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.745
SRR9715740Leave8.019
SRR9715741Leave8.824
SRR9715739Root2.234
SRR9715742Root10.270
SRR9715743Root8.022

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.144
SRR8749028MeJA induced 9h9.700
SRR8749029MeJA induced 9h10.562
SRR8749030Uninduced8.960
SRR8749031Uninduced12.120
SRR8749032Uninduced5.289

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.560
SRR8400027Control-Root11.363

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved