Gene detail information of Glyur000124s00011972.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24150.1 | 4.00E-66 | |
| NR | KHN22114.1 | 0 | hypothetical protein glysoja_033428 [Glycine soja] |
| trEMBL | tr|I1LZP3|I1LZP3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G22660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00124 | 321609 | 323583 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.178 |
| SRR1783600 | control | 21.329 |
| SRR1783602 | moderate drought stress | 37.091 |
| SRR1811619 | moderate drought stress | 37.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.767 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.576 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.009 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.853 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.389 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.017 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.069 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.070 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.559 |
| SRR2967015 | Control (Tissue:root) | 17.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.156 |
| SRR9715740 | Leave | 2.281 |
| SRR9715741 | Leave | 2.527 |
| SRR9715739 | Root | 15.343 |
| SRR9715742 | Root | 11.513 |
| SRR9715743 | Root | 11.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.389 |
| SRR8749028 | MeJA induced 9h | 3.883 |
| SRR8749029 | MeJA induced 9h | 3.945 |
| SRR8749030 | Uninduced | 1.166 |
| SRR8749031 | Uninduced | 0.453 |
| SRR8749032 | Uninduced | 0.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.949 |
| SRR8400027 | Control-Root | 18.638 |