Gene detail information of Glyur000125s00010008.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G04500.10glycosyltransferase family protein 47
NRXP_004496161.10PREDICTED: uncharacterized protein LOC101507497 [Cicer arietinum]
COGYP_866495.12.00E-31hypothetical protein Mmc1_2590 [Magnetococcus marinus MC-1]
Swissprottr|Q84WB7|GT645_ARATH0Glycosyltransferase family protein 64 protein C5 {ECO:0000303|PubMed:24905498}
trEMBLtr|A0A072VN21|A0A072VN21_MEDTR0Glycosyltransferase family protein {ECO:0000313|EMBL:KEH43369.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001254421949524+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT64


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006024  glycosaminoglycan biosynthetic process

GO:0015012  heparan sulfate proteoglycan biosynthetic process


cellular_component

GO:0016021  integral component of membrane


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000125s00010008.1PF09258.5Glyco_transf_644626932.00E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.145
SRR1783600control18.117
SRR1783602moderate drought stress13.154
SRR1811619moderate drought stress12.964

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.862
DRR006520Root Summer glycyrrhizin high producing strain37.798
DRR006521Root Winter glycyrrhizin high producing strain8.747
DRR006522Root Winter glycyrrhizin high producing strain8.599
DRR006523Root Summer glycyrrhizin low producing strain65.485
DRR006524Root Summer glycyrrhizin low producing strain65.616
DRR006525Leaf Summer glycyrrhizin high producing strain24.874
DRR006526Leaf Summer glycyrrhizin high producing strain24.604

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.605
SRR2868004Drought Stress(Tissue:root)54.218
SRR2967015Control (Tissue:root)47.301

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave81.110
SRR9715740Leave104.087
SRR9715741Leave122.286
SRR9715739Root89.869
SRR9715742Root201.270
SRR9715743Root172.521

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h109.869
SRR8749028MeJA induced 9h119.975
SRR8749029MeJA induced 9h161.851
SRR8749030Uninduced120.054
SRR8749031Uninduced315.608
SRR8749032Uninduced200.106

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.319
SRR8400027Control-Root59.073

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved