Gene detail information of Glyur000125s00010018.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04480.1 | 0 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_004496154.1 | 0 | PREDICTED: uncharacterized protein LOC101505326 [Cicer arietinum] |
| trEMBL | tr|A0A072VPQ5|A0A072VPQ5_MEDTR | 0 | UDP-glycosyltransferase family protein {ECO:0000313|EMBL:KEH43353.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00125 | 104189 | 113371 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000125s00010018.1 | PF00534.15 | Glycos_transf_1 | 400 | 514 | 5.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.910 |
| SRR1783600 | control | 8.855 |
| SRR1783602 | moderate drought stress | 5.422 |
| SRR1811619 | moderate drought stress | 5.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.750 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.705 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.051 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.068 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.996 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.923 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.466 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.896 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.040 |
| SRR2967015 | Control (Tissue:root) | 14.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.572 |
| SRR9715740 | Leave | 5.984 |
| SRR9715741 | Leave | 9.020 |
| SRR9715739 | Root | 2.302 |
| SRR9715742 | Root | 11.812 |
| SRR9715743 | Root | 9.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.833 |
| SRR8749028 | MeJA induced 9h | 7.978 |
| SRR8749029 | MeJA induced 9h | 6.344 |
| SRR8749030 | Uninduced | 7.852 |
| SRR8749031 | Uninduced | 4.194 |
| SRR8749032 | Uninduced | 3.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.626 |
| SRR8400027 | Control-Root | 14.623 |