Gene detail information of Glyur000125s00010046.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13540.1 | 5.00E-56 | myb domain protein 5 |
| NR | NP_001241492.1 | 3.08E-98 | uncharacterized protein LOC100782308 [Glycine max] |
| Swissprot | tr|Q38850|MYB5_ARATH | 8.00E-73 | Transcription repressor MYB5 |
| trEMBL | tr|F5HQF1|F5HQF1_SOYBN | 1.00E-98 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G24500.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00125 | 257030 | 258582 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000125s00010046.1 | PF00249.26 | Myb_DNA-binding | 65 | 112 | 9.70E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.025 |
| SRR1783600 | control | 0.096 |
| SRR1783602 | moderate drought stress | 0.133 |
| SRR1811619 | moderate drought stress | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.196 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.098 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.885 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.038 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.019 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.278 |
| SRR9715740 | Leave | 4.512 |
| SRR9715741 | Leave | 2.910 |
| SRR9715739 | Root | 0.070 |
| SRR9715742 | Root | 0.166 |
| SRR9715743 | Root | 0.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.167 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.019 |
| SRR8749031 | Uninduced | 0.090 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.104 |
| SRR8400027 | Control-Root | 0.214 |