Gene detail information of Glyur000126s00013635.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G32640.13.00E-164Basic helix-loop-helix (bHLH) DNA-binding family protein
NRXP_003612909.10BHLH transcription factor [Medicago truncatula]
Swissprottr|Q39204|MYC2_ARATH0Transcription factor MYC2
trEMBLtr|G7KF32|G7KF32_MEDTR0Basic helix loop helix (BHLH) family transcription factor {ECO:0000313|EMBL:AES95867.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0012667958762+


Gene family

Gene familysubfamily
Transcription Factors FamilybHLH


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0046983  protein dimerization activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000126s00013635.1PF14215.1bHLH-MYC_N472273.00E-52
Glyur000126s00013635.1PF00010.21HLH4735184.00E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control93.258
SRR1783600control93.819
SRR1783602moderate drought stress147.012
SRR1811619moderate drought stress146.550

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain325.529
DRR006520Root Summer glycyrrhizin high producing strain317.539
DRR006521Root Winter glycyrrhizin high producing strain71.370
DRR006522Root Winter glycyrrhizin high producing strain69.085
DRR006523Root Summer glycyrrhizin low producing strain364.187
DRR006524Root Summer glycyrrhizin low producing strain362.734
DRR006525Leaf Summer glycyrrhizin high producing strain44.667
DRR006526Leaf Summer glycyrrhizin high producing strain44.404

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)56.167
SRR2868004Drought Stress(Tissue:root)75.343
SRR2967015Control (Tissue:root)153.691

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave236.375
SRR9715740Leave162.944
SRR9715741Leave195.195
SRR9715739Root532.977
SRR9715742Root445.515
SRR9715743Root492.446

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h174.563
SRR8749028MeJA induced 9h146.108
SRR8749029MeJA induced 9h104.131
SRR8749030Uninduced157.732
SRR8749031Uninduced50.471
SRR8749032Uninduced115.032

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root108.790
SRR8400027Control-Root155.335

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved