Gene detail information of Glyur000126s00013651.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65670.2 | 7.00E-114 | indole-3-acetic acid inducible 9 |
| NR | XP_003517136.1 | 0 | PREDICTED: auxin-responsive protein IAA9 isoform X1 [Glycine max] |
| Swissprot | tr|Q38826|IAA8_ARATH | 2.00E-140 | Auxin-responsive protein IAA8 |
| trEMBL | tr|I1J4W6|I1J4W6_SOYBN | 0 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00126 | 174766 | 179775 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000126s00013651.2 | PF02309.11 | AUX_IAA | 69 | 348 | 2.10E-86 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 51.253 |
| SRR1783600 | control | 51.491 |
| SRR1783602 | moderate drought stress | 62.323 |
| SRR1811619 | moderate drought stress | 61.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 97.930 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 96.652 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 151.382 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 147.097 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 191.302 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 191.331 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.713 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 162.158 |
| SRR2868004 | Drought Stress(Tissue:root) | 308.017 |
| SRR2967015 | Control (Tissue:root) | 278.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 16.405 |
| SRR9715740 | Leave | 16.841 |
| SRR9715741 | Leave | 14.870 |
| SRR9715739 | Root | 126.091 |
| SRR9715742 | Root | 128.553 |
| SRR9715743 | Root | 129.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 792.499 |
| SRR8749028 | MeJA induced 9h | 776.621 |
| SRR8749029 | MeJA induced 9h | 647.638 |
| SRR8749030 | Uninduced | 98.790 |
| SRR8749031 | Uninduced | 96.741 |
| SRR8749032 | Uninduced | 105.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 103.582 |
| SRR8400027 | Control-Root | 117.619 |