Gene detail information of Glyur000127s00009151.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38180.1 | 1.00E-26 | FAR1-related sequence 5 |
| NR | XP_006595317.1 | 1.27E-113 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max] |
| Swissprot | tr|Q9SZL8|FRS5_ARATH | 1.00E-27 | Protein FAR1-RELATED SEQUENCE 5 |
| trEMBL | tr|K7L283|K7L283_SOYBN | 5.00E-140 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G25623.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00127 | 86922 | 89692 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000127s00009151.1 | PF03101.10 | FAR1 | 124 | 216 | 1.70E-17 |
| Glyur000127s00009151.1 | PF04434.12 | SWIM | 481 | 506 | 1.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.085 |
| SRR1783600 | control | 0.087 |
| SRR1783602 | moderate drought stress | 1.559 |
| SRR1811619 | moderate drought stress | 1.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.101 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.100 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.278 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.303 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.449 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.312 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.664 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.283 |
| SRR2967015 | Control (Tissue:root) | 1.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.164 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 1.413 |
| SRR9715739 | Root | 0.024 |
| SRR9715742 | Root | 0.525 |
| SRR9715743 | Root | 0.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.002 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.967 |
| SRR8400027 | Control-Root | 2.317 |