Gene detail information of Glyur000127s00009183.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G46920.19.00E-163Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
NRXP_003609514.10Dual specificity protein kinase pyk2 [Medicago truncatula]
COGYP_001958461.12.00E-27hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q05609|CTR1_ARATH2.00E-49Serine/threonine-protein kinase CTR1
trEMBLtr|G7JHT2|G7JHT2_MEDTR0Octicosapeptide/phox/Bem1p domain kinase superfamily protein {ECO:0000313|EMBL:AES91711.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00127251591258188+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000127s00009183.1PF00564.19PB11622459.10E-18
Glyur000127s00009183.1PF07714.12Pkinase_Tyr109913671.00E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.083
SRR1783600control16.135
SRR1783602moderate drought stress15.478
SRR1811619moderate drought stress15.484

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.313
DRR006520Root Summer glycyrrhizin high producing strain11.159
DRR006521Root Winter glycyrrhizin high producing strain7.840
DRR006522Root Winter glycyrrhizin high producing strain7.574
DRR006523Root Summer glycyrrhizin low producing strain13.945
DRR006524Root Summer glycyrrhizin low producing strain13.988
DRR006525Leaf Summer glycyrrhizin high producing strain3.426
DRR006526Leaf Summer glycyrrhizin high producing strain3.469

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.462
SRR2868004Drought Stress(Tissue:root)23.037
SRR2967015Control (Tissue:root)18.096

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.499
SRR9715740Leave6.058
SRR9715741Leave5.082
SRR9715739Root5.323
SRR9715742Root17.676
SRR9715743Root14.932

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.320
SRR8749028MeJA induced 9h17.100
SRR8749029MeJA induced 9h9.986
SRR8749030Uninduced17.049
SRR8749031Uninduced10.194
SRR8749032Uninduced7.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.182
SRR8400027Control-Root19.543

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved