Gene detail information of Glyur000127s00009185.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G11060.18.00E-113KNOTTED1-like homeobox gene 4
NRXP_007155117.10hypothetical protein PHAVU_003G174900g [Phaseolus vulgaris]
Swissprottr|P48001|KNAT4_ARATH5.00E-150Homeobox protein knotted-1-like 4
trEMBLtr|V7CDZ8|V7CDZ8_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW27111.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00127260909264802-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000127s00009185.1PF03790.8KNOX1681092.60E-17
Glyur000127s00009185.1PF03791.8KNOX21231743.80E-19
Glyur000127s00009185.1PF05920.6Homeobox_KN2623012.10E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.139
SRR1783600control18.192
SRR1783602moderate drought stress17.759
SRR1811619moderate drought stress17.838

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.945
DRR006520Root Summer glycyrrhizin high producing strain45.492
DRR006521Root Winter glycyrrhizin high producing strain199.702
DRR006522Root Winter glycyrrhizin high producing strain195.852
DRR006523Root Summer glycyrrhizin low producing strain58.298
DRR006524Root Summer glycyrrhizin low producing strain57.964
DRR006525Leaf Summer glycyrrhizin high producing strain141.473
DRR006526Leaf Summer glycyrrhizin high producing strain138.877

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.803
SRR2868004Drought Stress(Tissue:root)50.398
SRR2967015Control (Tissue:root)72.281

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave71.943
SRR9715740Leave96.807
SRR9715741Leave70.134
SRR9715739Root10.675
SRR9715742Root28.822
SRR9715743Root22.331

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.618
SRR8749028MeJA induced 9h42.177
SRR8749029MeJA induced 9h38.952
SRR8749030Uninduced39.661
SRR8749031Uninduced38.350
SRR8749032Uninduced18.058

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.028
SRR8400027Control-Root30.528

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved