Gene detail information of Glyur000128s00010774.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G52340.13.00E-100NAD(P)-binding Rossmann-fold superfamily protein
NRXP_004499827.12.83E-154PREDICTED: xanthoxin dehydrogenase-like [Cicer arietinum]
COGYP_289531.15.00E-61short-chain dehydrogenase/reductase (SDR) family protein [Thermobifida fusca YX]
Swissprottr|Q9C826|ABA2_ARATH6.00E-125Xanthoxin dehydrogenase
trEMBLtr|I1LLA0|I1LLA0_SOYBN9.00E-151Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G21180.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001286174262668-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09841ABA2 EC:1.1.1.288 Carotenoid biosynthesis map00906


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000128s00010774.1PF00106.20adh_short141811.90E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.979
SRR1783600control10.218
SRR1783602moderate drought stress11.462
SRR1811619moderate drought stress12.369

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.774
DRR006520Root Summer glycyrrhizin high producing strain5.069
DRR006521Root Winter glycyrrhizin high producing strain2.029
DRR006522Root Winter glycyrrhizin high producing strain2.154
DRR006523Root Summer glycyrrhizin low producing strain6.775
DRR006524Root Summer glycyrrhizin low producing strain6.599
DRR006525Leaf Summer glycyrrhizin high producing strain4.486
DRR006526Leaf Summer glycyrrhizin high producing strain4.452

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.298
SRR2868004Drought Stress(Tissue:root)9.738
SRR2967015Control (Tissue:root)12.186

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.169
SRR9715740Leave1.362
SRR9715741Leave1.874
SRR9715739Root5.858
SRR9715742Root5.593
SRR9715743Root5.788

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.887
SRR8749028MeJA induced 9h10.522
SRR8749029MeJA induced 9h10.341
SRR8749030Uninduced7.232
SRR8749031Uninduced5.149
SRR8749032Uninduced5.680

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.668
SRR8400027Control-Root6.197

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved