Gene detail information of Glyur000128s00010777.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52340.1 | 1.00E-100 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | KHN13691.1 | 4.36E-155 | Xanthoxin dehydrogenase [Glycine soja] |
| COG | YP_289531.1 | 1.00E-61 | short-chain dehydrogenase/reductase (SDR) family protein [Thermobifida fusca YX] |
| Swissprot | tr|Q9C826|ABA2_ARATH | 2.00E-125 | Xanthoxin dehydrogenase |
| trEMBL | tr|I1LLA0|I1LLA0_SOYBN | 3.00E-153 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G21180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 66065 | 68579 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K09841 | ABA2 | EC:1.1.1.288 | Carotenoid biosynthesis | map00906 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010777.1 | PF00106.20 | adh_short | 12 | 179 | 3.80E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.410 |
| SRR1783600 | control | 5.092 |
| SRR1783602 | moderate drought stress | 4.944 |
| SRR1811619 | moderate drought stress | 4.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.829 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.575 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.970 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.356 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.327 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.435 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.568 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 23.127 |
| SRR2868004 | Drought Stress(Tissue:root) | 17.085 |
| SRR2967015 | Control (Tissue:root) | 19.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.761 |
| SRR9715740 | Leave | 2.932 |
| SRR9715741 | Leave | 3.852 |
| SRR9715739 | Root | 11.272 |
| SRR9715742 | Root | 10.324 |
| SRR9715743 | Root | 12.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.517 |
| SRR8749028 | MeJA induced 9h | 20.361 |
| SRR8749029 | MeJA induced 9h | 22.107 |
| SRR8749030 | Uninduced | 15.014 |
| SRR8749031 | Uninduced | 12.043 |
| SRR8749032 | Uninduced | 10.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.816 |
| SRR8400027 | Control-Root | 17.178 |