Gene detail information of Glyur000128s00010812.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G10530.12.00E-135Concanavalin A-like lectin protein kinase family protein
NRXP_003550213.10PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max]
COGYP_003797670.12.00E-25putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprottr|Q9LXA5|LRK91_ARATH0L-type lectin-domain containing receptor kinase IX.1 (Precursor)
trEMBLtr|I1MX00|I1MX00_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G33370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00128284754287075-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000128s00010812.1PF00139.14Lectin_legB332667.20E-56
Glyur000128s00010812.1PF00069.20Pkinase3585581.90E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.999
SRR1783600control0.998
SRR1783602moderate drought stress3.870
SRR1811619moderate drought stress3.981

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.867
DRR006520Root Summer glycyrrhizin high producing strain3.685
DRR006521Root Winter glycyrrhizin high producing strain30.706
DRR006522Root Winter glycyrrhizin high producing strain30.218
DRR006523Root Summer glycyrrhizin low producing strain6.968
DRR006524Root Summer glycyrrhizin low producing strain7.489
DRR006525Leaf Summer glycyrrhizin high producing strain2.782
DRR006526Leaf Summer glycyrrhizin high producing strain2.854

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.057
SRR2868004Drought Stress(Tissue:root)28.801
SRR2967015Control (Tissue:root)32.084

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.631
SRR9715740Leave3.480
SRR9715741Leave20.057
SRR9715739Root10.389
SRR9715742Root11.842
SRR9715743Root10.912

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.306
SRR8749028MeJA induced 9h42.653
SRR8749029MeJA induced 9h24.320
SRR8749030Uninduced27.692
SRR8749031Uninduced41.392
SRR8749032Uninduced21.343

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.336
SRR8400027Control-Root11.385

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved