Gene detail information of Glyur000128s00010817.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31870.11.00E-81glutathione peroxidase 7
NRXP_006600118.15.38E-138PREDICTED: uncharacterized protein LOC100305775 isoform X1 [Glycine max]
COGYP_003654553.18.00E-53peroxiredoxin [Arcobacter nitrofigilis DSM 7299]
Swissprottr|O24296|GPX1_PEA3.00E-138Phospholipid hydroperoxide glutathione peroxidase, chloroplastic (Precursor)
trEMBLtr|I1MX61|I1MX61_SOYBN2.00E-138Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00128316300319863-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00432gpx EC:1.11.1.9 Arachidonic acid metabolism map00590
Glutathione metabolismmap00480
Thyroid hormone synthesismap04918


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004602  glutathione peroxidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000128s00010817.1PF00255.14GSHPx781861.00E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.379
SRR1783600control27.913
SRR1783602moderate drought stress22.556
SRR1811619moderate drought stress23.077

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.141
DRR006520Root Summer glycyrrhizin high producing strain31.192
DRR006521Root Winter glycyrrhizin high producing strain49.865
DRR006522Root Winter glycyrrhizin high producing strain49.072
DRR006523Root Summer glycyrrhizin low producing strain30.365
DRR006524Root Summer glycyrrhizin low producing strain32.637
DRR006525Leaf Summer glycyrrhizin high producing strain91.564
DRR006526Leaf Summer glycyrrhizin high producing strain89.205

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.569
SRR2868004Drought Stress(Tissue:root)20.074
SRR2967015Control (Tissue:root)14.228

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave134.417
SRR9715740Leave170.104
SRR9715741Leave130.467
SRR9715739Root7.811
SRR9715742Root18.203
SRR9715743Root14.370

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.625
SRR8749028MeJA induced 9h25.156
SRR8749029MeJA induced 9h23.467
SRR8749030Uninduced28.982
SRR8749031Uninduced17.128
SRR8749032Uninduced15.161

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.983
SRR8400027Control-Root39.865

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved