Gene detail information of Glyur000129s00012434.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33420.11.00E-126Peroxidase superfamily protein
NRXP_004495440.10PREDICTED: peroxidase 47-like [Cicer arietinum]
Swissprottr|Q9SZB9|PER47_ARATH1.00E-161Peroxidase 47 (Precursor)
trEMBLtr|A0A072VLG5|A0A072VLG5_MEDTR0Peroxidase family protein {ECO:0000313|EMBL:KEH42844.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001293571737945-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000129s00012434.1PF00141.18peroxidase612966.60E-77


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.570
SRR1783600control5.667
SRR1783602moderate drought stress4.919
SRR1811619moderate drought stress4.823

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.210
DRR006520Root Summer glycyrrhizin high producing strain20.247
DRR006521Root Winter glycyrrhizin high producing strain0.283
DRR006522Root Winter glycyrrhizin high producing strain0.276
DRR006523Root Summer glycyrrhizin low producing strain18.429
DRR006524Root Summer glycyrrhizin low producing strain18.419
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)110.672
SRR2868004Drought Stress(Tissue:root)153.343
SRR2967015Control (Tissue:root)195.109

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.714
SRR9715740Leave1.157
SRR9715741Leave1.027
SRR9715739Root12.782
SRR9715742Root50.041
SRR9715743Root40.492

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.498
SRR8749028MeJA induced 9h4.091
SRR8749029MeJA induced 9h3.372
SRR8749030Uninduced1.998
SRR8749031Uninduced1.011
SRR8749032Uninduced0.483

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.183
SRR8400027Control-Root14.091

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved