Gene detail

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Gene detail information of Glyur000129s00012444.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G10300.1	7.00E-45	RmlC-like cupins superfamily protein
NR	NP_001234944.1	9.66E-62	uncharacterized protein LOC100499968 [Glycine max]
COG	YP_113172.1	3.00E-36	hypothetical protein MCA0659 [Methylococcus capsulatus str. Bath]
Swissprot	tr\|O82616\|SCRK5_ARATH	2.00E-178	Probable fructokinase-5
trEMBL	tr\|C6SYR7\|C6SYR7_SOYBN	4.00E-62	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G35580.1}

Sequence

Transcript Sequence

>Glyur000129s00012444.2
GTCTAGAACTAGAATGTACAGATGAGAAATGAGTGAACGAAAACCAAAGATAAATTTGTATATAAAAATAAGGTAAGCAATCTAACAACTCTAAACCAAAGCTTCAAAAATATTCTTCATTTTTGTTGTTGCANTGGCATCATCATCATACGTGGGTACTTTTACTTTATCACCCAACCCGTCTCTACTATTCCCACAAACCAAACACTCGGCTGCTAGCAGGGTAAGGGTAACTTTTCCTTCAACAACAACAAGGAGGAGAGTGGTAAGAGCTGGGAGCATGAGTACTGTCACAGAGAAACTGGGCATCAAGATTGAAAGGAACCCTCCTGAGTCCAAGCTCACTCAACTCGGTGTCAGGCAGTGGCCCAAATGGGGTTGCCCTCCAAGCAAATTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTTTGGAAGGAAAAGTGAAGGTTACTCCTAGTGGGGCGAGTGAGGCAGTTGAAATTGGTGCTGGTGACTTGGTTGTGTTTCCAAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGCTGTGGATAAGCACTATAACTTTGAATAAAATCCTTCAACTACAAGGGGTGCAGCCTAANAAATGAAGATGATGGAGGACTTTCATGAATTGATTTGGCATAATATTCTGTGTGTAAAGTTGGATATAACAAAGACGAGCAAGTGTAGCTATTCTGGTTGAAGCTGTTATCCTTGCCTTCTGTAGTGAATGTTTGACATGAGTACTTGTTTGAGGTGGGTATAAATGATANAATAATTGAGGTCTCTTTCATATCTTATGATAGATAAGATAAATAATAAAATTCATTAATAGGACAGTAATGTAGGGATTTGAAAAAATAGAGTTTCATTTGAGCCATACTTATTTCGAATAAGTCAAGCCAATAGGAAGAACTAAACAAATTCTGCATCATTTAAGCAATGTAACATGCACATCAGTATCAATTAAGTGTATGGTTACAAAAAAGAAAAAGATAAAAGATAAAAGGAGATGAAGAAAATAGAAATAGCAAAGAAATATGTTAGGTTTTATTTGTAATAAATCTGAGATGAACTTGCTACCCTGATTGATTTTTGTAAAAGAAAAATATTAACAACACACTCNCTGCGTATAATCATAGTGCAATTTTCAATTGCTATGACTATTTGCAACCTCATATACCCCATGAAGTCAGGTCAACGTGTCTCCATGGATGGGCATCTCCCATTGCTAAACGTCACCTTTTAAGGGAAGGGTGTGCGTATTTTATGACCTCAAAAATAGCTTCCCCAACGGAAAATGAACCCAAATTTAAGGGACTATTATTGTTACATGGTAAGTTTATGTGGTGTTTTTCTATTGTTCCTCTTCAAANGCATTCATTCTCGGATCAAGCAAGCTTATTGTTGATGTTCTTTTTTACGTGCTGTCAAGCAACCAAATGTTTTCTGACAACACCTAAAAAATTGGCAAAATTAATTTGCATTTGACTTCGACAAATCTTTCTTTTCTTTTCTTTTTTTGTTAAAATTNAATATGAGTCTGTTTGTCTAAATTCCTTGTATTAAAGTCCTCACTACAAAATAATTCAATGGGTAATTGAGGAAAAATAAGGTTCAACTAATTAGTCAGCATCTATTGGNAGCTTACACTTGTACCCTTAAATTCTTTGTTTCTTTTACTCTGGGACNAATATAACTAAGACCCTATAATCTCATTTGGATAGAAGTGAAACCATATTGAGATTTTGAATAATAAAGATATTGGAGATTGCCCCAACTTTCTTTTGGCTAATAACAGTCCACACTTGGATCGTCACTAACATAAAATCATAAAATTTAGACCAGCAACTATAAAAAAAAGACAAACAAAGACACACTGACACAAAAACTCTTAATCCAACGTTGAATCATTTATAGGCCACCTGTTGCATTGTTGAGGCTTCACCCTCAAATTATTTTGTGAGACNCAAAGACATCATCATCAGCAGCAGCAGCAACAACAACAGTAACAGATAGAGAAGGAAGAAGAAGAAGAAGATGGGCTCAGCAGATCCATTAGTGATATCATTTGGTGAGATGCTCATAGACTTTGTTCCTGACACATCTGGTGTCTCCTTGGCCGAGTCTCATGCCTTCATCAAAGCCCCTGGAGGTGCCCCTGCCAATGTGGCCTGTGCCATATCCAAACTTGGTGGTAAAGCTGCCTTCATTGGCAAGGTGGGAGAAGATGAGTTTGGAAGGATGCTAGTTGACATCTTGAAGAAAAATGGGGTCACTACAGATGGTGTTTGTTTTGACAAGGAGGCTAGAACTGCATTGGCTTTTGTGACACTAAGGAAGGATGGGGAGAGGGAGTTCATGTTTTATAGAAACCCCAGTGCAGATATGTTGCTGAAGGAGTCTGAATTGAACGTGGGTTTGATTAAGCAGGCCAAGATATTCCACTATGGATCTATNAGCCTCATATCAGAGCCATGCAGATCAGCTCACATGGCAGCCATGAAGGCTGCNAGAGAAGGTGGTGCATTGCTGTCCTATGATCCAAACGTGAGGCTTCTTCTGTGGCCTTCTCCCGAGGCTGCTAGGACCGGCATCAAGAGCATTTGGTCTGAGGCTGATTTCATCAAGGTGAGTGATGATGAAGTTGAATTTCTTACACAAGGAGATCCTGAGAAGGAAGATGTTGTCATGTCCCTGTGGCATGACAAATTGAAGTTGCTTCTTGTCACTGATGGAGAGAAGGGTTGCAGATATATCACCAAGAACTTTAAAGGAAGGGTAAAAGGGTTCTCAGTGAAGGCAGTTGACACAACTGGTGCTGGTGATTCTTTTAACGAACCAAAATTGATAGAGGCTTTGACGTTTGCAAATGCTTGTGGAGCAATGTGTACAACACAGAAGGGAGCAATTCCGGCACTTCCAACCGCCGCAGAGGCTCAGAAATTTATTTCCAGCTCTAAAGCGAATTAAAGTTTCCTTTGAAATTTGACAGTCCAGAGGACTATAGCTATTCATTCCCATTTGAGAGTTTTGTTTAATAAGCCTTTGAT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00129	75943	80745	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00847	E2.7.1.4, scrK	EC:2.7.1.4	Fructose and mannose metabolism	map00051
			Starch and sucrose metabolism	map00500
			Amino sugar and nucleotide sugar metabolism	map00520

Gene Ontology

molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000129s00012444.2	PF00294.19	PfkB	7	296	8.60E-64

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.080
SRR1783600	control	5.268
SRR1783602	moderate drought stress	6.175
SRR1811619	moderate drought stress	6.172

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.265
DRR006520	Root Summer glycyrrhizin high producing strain	11.042
DRR006521	Root Winter glycyrrhizin high producing strain	9.754
DRR006522	Root Winter glycyrrhizin high producing strain	9.535
DRR006523	Root Summer glycyrrhizin low producing strain	11.067
DRR006524	Root Summer glycyrrhizin low producing strain	11.052
DRR006525	Leaf Summer glycyrrhizin high producing strain	71.206
DRR006526	Leaf Summer glycyrrhizin high producing strain	70.769

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	20.278
SRR2868004	Drought Stress(Tissue:root)	18.860
SRR2967015	Control (Tissue:root)	15.814

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	95.738
SRR9715740	Leave	135.452
SRR9715741	Leave	94.450
SRR9715739	Root	8.826
SRR9715742	Root	8.895
SRR9715743	Root	8.738

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.040
SRR8749028	MeJA induced 9h	8.688
SRR8749029	MeJA induced 9h	15.482
SRR8749030	Uninduced	9.851
SRR8749031	Uninduced	6.782
SRR8749032	Uninduced	9.119

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	22.134
SRR8400027	Control-Root	19.640