Gene detail information of Glyur000129s00012448.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51560.10Leucine-rich repeat protein kinase family protein
NRXP_003536190.10PREDICTED: somatic embryogenesis receptor kinase 5-like [Glycine max]
COGYP_004735589.18.00E-27Receptor-like protein kinase [Zobellia galactanivorans]
Swissprottr|Q8RY65|NIK2_ARATH4.00E-68Protein NSP-INTERACTING KINASE 2 (Precursor)
trEMBLtr|I1LC21|I1LC21_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G32090.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00129100319103506+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000129s00012448.1PF08263.7LRRNT_229692.30E-07
Glyur000129s00012448.1PF13855.1LRR_81442049.50E-07
Glyur000129s00012448.1PF00560.28LRR_12172390.57
Glyur000129s00012448.1PF07714.12Pkinase_Tyr4206811.00E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.106
SRR1783600control6.046
SRR1783602moderate drought stress8.922
SRR1811619moderate drought stress9.010

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.293
DRR006520Root Summer glycyrrhizin high producing strain13.000
DRR006521Root Winter glycyrrhizin high producing strain1.415
DRR006522Root Winter glycyrrhizin high producing strain1.423
DRR006523Root Summer glycyrrhizin low producing strain6.507
DRR006524Root Summer glycyrrhizin low producing strain6.849
DRR006525Leaf Summer glycyrrhizin high producing strain1.140
DRR006526Leaf Summer glycyrrhizin high producing strain1.113

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.412
SRR2868004Drought Stress(Tissue:root)2.303
SRR2967015Control (Tissue:root)3.385

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.937
SRR9715740Leave1.385
SRR9715741Leave1.647
SRR9715739Root16.041
SRR9715742Root17.802
SRR9715743Root17.469

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.043
SRR8749028MeJA induced 9h0.027
SRR8749029MeJA induced 9h0.024
SRR8749030Uninduced0.151
SRR8749031Uninduced0.000
SRR8749032Uninduced0.045

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.363
SRR8400027Control-Root10.147

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved