Gene detail information of Glyur000129s00012466.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G22960.10Pyruvate kinase family protein
NRXP_004495407.10PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Cicer arietinum]
COGYP_003549397.13.00E-79pyruvate kinase [Coraliomargarita akajimensis DSM 45221]
Swissprottr|Q43117|KPYA_RICCO0Pyruvate kinase isozyme A, chloroplastic (Precursor)
trEMBLtr|A0A072VLB0|A0A072VLB0_MEDTR0Pyruvate kinase {ECO:0000256|RuleBase:RU000504}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00129207725214628+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00873PK, pyk EC:2.7.1.40 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230
Viral carcinogenesismap05203
Type II diabetes mellitusmap04930


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0000287  magnesium ion binding

GO:0003824  catalytic activity

GO:0004743  pyruvate kinase activity

GO:0030955  potassium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000129s00012466.1PF00224.16PK901451.50E-13
Glyur000129s00012466.1PF00224.16PK3064745.50E-57
Glyur000129s00012466.1PF02887.11PK_C4975972.50E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control73.528
SRR1783600control72.920
SRR1783602moderate drought stress97.106
SRR1811619moderate drought stress94.539

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain99.709
DRR006520Root Summer glycyrrhizin high producing strain97.672
DRR006521Root Winter glycyrrhizin high producing strain38.145
DRR006522Root Winter glycyrrhizin high producing strain38.314
DRR006523Root Summer glycyrrhizin low producing strain90.611
DRR006524Root Summer glycyrrhizin low producing strain90.428
DRR006525Leaf Summer glycyrrhizin high producing strain32.126
DRR006526Leaf Summer glycyrrhizin high producing strain32.297

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)90.655
SRR2868004Drought Stress(Tissue:root)60.540
SRR2967015Control (Tissue:root)65.537

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.210
SRR9715740Leave30.478
SRR9715741Leave22.522
SRR9715739Root142.322
SRR9715742Root118.684
SRR9715743Root120.151

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.410
SRR8749028MeJA induced 9h20.926
SRR8749029MeJA induced 9h15.959
SRR8749030Uninduced4.621
SRR8749031Uninduced2.575
SRR8749032Uninduced6.881

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root137.371
SRR8400027Control-Root139.029

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved