Gene detail information of Glyur000130s00006890.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75250.1 | 4.00E-25 | RAD-like 6 |
| NR | XP_007150886.1 | 2.55E-34 | hypothetical protein PHAVU_004G002400g [Phaseolus vulgaris] |
| Swissprot | tr|Q58FS3|RAD_ANTMA | 1.00E-32 | Transcription factor RADIALIS |
| trEMBL | tr|V7C0Q6|V7C0Q6_PHAVU | 9.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:ESW22880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00130 | 57817 | 58038 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000130s00006890.1 | PF00249.26 | Myb_DNA-binding | 2 | 47 | 6.00E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.461 |
| SRR1783600 | control | 1.001 |
| SRR1783602 | moderate drought stress | 0.993 |
| SRR1811619 | moderate drought stress | 0.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.700 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.250 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.349 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.498 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.498 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.750 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.975 |
| SRR9715740 | Leave | 4.205 |
| SRR9715741 | Leave | 0.851 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.068 |
| SRR8400027 | Control-Root | 0.168 |