Gene detail information of Glyur000130s00006896.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01640.16.00E-155glucuronokinase G
NRAFK38588.10unknown [Medicago truncatula]
COGYP_003388968.15.00E-88GHMP kinase [Spirosoma linguale DSM 74]
Swissprottr|Q93ZC9|GLAK1_ARATH0Glucuronokinase 1
trEMBLtr|I3SE96|I3SE96_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK38588.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001308341688038-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16190GLCAK EC:2.7.1.43 Pentose and glucuronate interconversions map00040
Ascorbate and aldarate metabolismmap00053
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0008152  metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0005524  ATP binding

GO:0016301  kinase activity

GO:0016773  phosphotransferase activity, alcohol group as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000130s00006896.1PF00288.21GHMP_kinases_N1081761.80E-09
Glyur000130s00006896.1PF08544.8GHMP_kinases_C2523163.30E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.501
SRR1783600control17.262
SRR1783602moderate drought stress11.466
SRR1811619moderate drought stress11.360

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain54.402
DRR006520Root Summer glycyrrhizin high producing strain54.064
DRR006521Root Winter glycyrrhizin high producing strain29.392
DRR006522Root Winter glycyrrhizin high producing strain29.451
DRR006523Root Summer glycyrrhizin low producing strain64.421
DRR006524Root Summer glycyrrhizin low producing strain63.533
DRR006525Leaf Summer glycyrrhizin high producing strain4.964
DRR006526Leaf Summer glycyrrhizin high producing strain4.500

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.410
SRR2868004Drought Stress(Tissue:root)27.453
SRR2967015Control (Tissue:root)21.991

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave54.148
SRR9715740Leave25.763
SRR9715741Leave82.427
SRR9715739Root18.454
SRR9715742Root52.612
SRR9715743Root46.864

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.575
SRR8749028MeJA induced 9h61.175
SRR8749029MeJA induced 9h66.017
SRR8749030Uninduced68.677
SRR8749031Uninduced62.487
SRR8749032Uninduced95.714

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.622
SRR8400027Control-Root29.216

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved