Gene detail information of Glyur000130s00006897.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G50180.13.00E-155Protein kinase superfamily protein
NRXP_004489198.10PREDICTED: serine/threonine-protein kinase HT1-like [Cicer arietinum]
COGNP_869262.16.00E-30serine/threonine-protein kinase pknH [Rhodopirellula baltica SH 1]
Swissprottr|Q2MHE4|HT1_ARATH3.00E-69Serine/threonine-protein kinase HT1
trEMBLtr|V7BY98|V7BY98_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW22904.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001309101394813+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000130s00006897.1PF07714.12Pkinase_Tyr313053.20E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.986
SRR1783600control40.117
SRR1783602moderate drought stress41.947
SRR1811619moderate drought stress41.708

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain105.577
DRR006520Root Summer glycyrrhizin high producing strain105.315
DRR006521Root Winter glycyrrhizin high producing strain82.486
DRR006522Root Winter glycyrrhizin high producing strain80.479
DRR006523Root Summer glycyrrhizin low producing strain183.180
DRR006524Root Summer glycyrrhizin low producing strain183.991
DRR006525Leaf Summer glycyrrhizin high producing strain35.302
DRR006526Leaf Summer glycyrrhizin high producing strain36.179

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)51.984
SRR2868004Drought Stress(Tissue:root)77.330
SRR2967015Control (Tissue:root)81.130

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave108.977
SRR9715740Leave103.410
SRR9715741Leave145.271
SRR9715739Root34.888
SRR9715742Root124.104
SRR9715743Root108.209

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h111.063
SRR8749028MeJA induced 9h256.201
SRR8749029MeJA induced 9h185.537
SRR8749030Uninduced241.379
SRR8749031Uninduced161.749
SRR8749032Uninduced170.049

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root57.318
SRR8400027Control-Root73.374

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved