Gene detail

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Gene detail information of Glyur000130s00006898.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G01600.1	5.00E-70	NAC domain containing protein 44
NR	XP_006603789.1	0	PREDICTED: NAC domain-containing protein 8-like [Glycine max]
Swissprot	tr\|Q6NQK2\|NAC8_ARATH	1.00E-78	NAC domain-containing protein 8
trEMBL	tr\|K7KNP9\|K7KNP9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G09110.3}

Sequence

Transcript Sequence

>Glyur000130s00006898.1
GGAGACAAGACAGCAACTTCCGAAGCAGAGGCTCGGACTCATNCAGTCAATAGTGGACCCCATTCATATTCCAGCTTCGGATACCGAATGTCTCAAAGAGTTTCCCGCTCTCTCACACTCGCAGAGCCAGAGAGAGTCTTTGTTTCTCGCACAGACAGCACAAAACAACCTTACTCGCTCCCCACGACAACCTTAAATACTCACAAGTCACCACTCCACTAAGACGCGACGCTTTCTCTTCTTTCCTCCTTCNGCAGCTCTTCCATTCCATAGCATGGCTAGGAGCTGGCTTATTGACATCGGAGGATTTGCAAAGAAAGTGAAAAATACTACTCTGTCAACAGCTGATCAAATCAAGGANTGTGGAGCATATCGTGAATGCCCAAAATGTCATTATCATATTGATAACAGTGATGTTTCTGCCGAGTGGCCTGGCTTTCCTATTGGTGTAAAGTTTGATCCTTCTGATGTTGAACTTTTAGAACATTTAGCAGCAAAGTGTGGTATTGGAAACAGAGAGNCACACATGTTTATCCATGAGTTCATCCCAACTCTAGAAGGAGACCAAGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTGCTAAGAAAGATGGGAGTAGTATCCATTTCTTTCACAGAACANTTAATGCATATGCTATTGGACAAAGAAAGCGTCGAAAGATTCATCATCAGCATGGTTTGACTGAGGAGCATGTACGCTGGCACAAGACTGGCAAGAACAAAGCTATAGTTGAAAATGGTGAGCACAAGGGCTTTAAGAAGATCATGGTTCTTTATGTAAGAGCTAATAAAGGGTCCAAGCCATGTAAATCCAATTGGGTGATGCATCAATACCATCTTGGGAGTGAAGAAGATGAGAAGGATGGGGAGTATGTGGTCTCAAAAGTCTTTTATCAACAGCAGAAGCAGACTGAGAAAAATGAGGAGAATCNAGTGGTTGAAGATTCTGACATGGCATCACGAACAAATCCAAGAACCCCAAAACCAAATCCCCCCAATCGACCACATGCAGAAAAATGTGTTGACTATGATGACGATTTTGATGAAAAAGAACGTCCCTCATCAATCCAGGATGCCAAGTCTATACCCAGAGAATCAAATGCCCCAACTTCTGATGTAAAGGATGAGGAACCTGCATGGTTGGCTGGTGAATCACAGGGTGTCTGTGACTTNGATGGCTTGGATGACATCTTATTATGCAAGGAGATGTTAGATTCTTCTGGTTTCTTAAATGANTCTGGATTTGCCTCATCCACTGTTGATGGCTTTGCTTGCAATGTAAACGAATTTGGTGAAAATGATAATGCATCATATGGAATTTCTGTCCTGGACACACTGGAATTAGATACTCCTCCAGAATTTGATCTTTCTAATTTGCCTCAAGACAGTAGTATCCTTGAGTGGTTGGACAGGTTATAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00130	95396	99034	+

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000130s00006898.1	PF02365.10	NAM	56	197	1.90E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.147
SRR1783600	control	6.070
SRR1783602	moderate drought stress	2.319
SRR1811619	moderate drought stress	2.299

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.703
DRR006520	Root Summer glycyrrhizin high producing strain	2.554
DRR006521	Root Winter glycyrrhizin high producing strain	0.227
DRR006522	Root Winter glycyrrhizin high producing strain	0.225
DRR006523	Root Summer glycyrrhizin low producing strain	7.229
DRR006524	Root Summer glycyrrhizin low producing strain	6.932
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.836
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.864

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	7.980
SRR2868004	Drought Stress(Tissue:root)	4.499
SRR2967015	Control (Tissue:root)	5.143

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	2.137
SRR9715740	Leave	1.235
SRR9715741	Leave	1.785
SRR9715739	Root	2.549
SRR9715742	Root	4.585
SRR9715743	Root	4.168

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	27.723
SRR8749028	MeJA induced 9h	37.917
SRR8749029	MeJA induced 9h	20.075
SRR8749030	Uninduced	9.829
SRR8749031	Uninduced	3.208
SRR8749032	Uninduced	2.122

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	11.224
SRR8400027	Control-Root	10.111