Gene detail information of Glyur000130s00006900.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G27540.10beta-1,4-N-acetylglucosaminyltransferase family protein
NRXP_007150913.10hypothetical protein PHAVU_004G005100g [Phaseolus vulgaris]
COGYP_004985011.14.00E-11glycosyl transferase group 1 (modular protein), partial [Azospirillum brasilense Sp245]
trEMBLtr|V7BY33|V7BY33_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW22907.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00130105641108124-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT17


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00737MGAT3 EC:2.4.1.144 N-Glycan biosynthesis map00510


Gene Ontology

biological_process

GO:0006487  protein N-linked glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0003830  beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000130s00006900.1PF04724.8Glyco_transf_17303873.70E-176


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.525
SRR1783600control0.532
SRR1783602moderate drought stress1.098
SRR1811619moderate drought stress1.109

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.843
DRR006520Root Summer glycyrrhizin high producing strain2.775
DRR006521Root Winter glycyrrhizin high producing strain1.474
DRR006522Root Winter glycyrrhizin high producing strain1.249
DRR006523Root Summer glycyrrhizin low producing strain4.748
DRR006524Root Summer glycyrrhizin low producing strain4.654
DRR006525Leaf Summer glycyrrhizin high producing strain45.072
DRR006526Leaf Summer glycyrrhizin high producing strain44.368

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.940
SRR2868004Drought Stress(Tissue:root)1.732
SRR2967015Control (Tissue:root)1.680

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.298
SRR9715740Leave24.469
SRR9715741Leave31.630
SRR9715739Root0.456
SRR9715742Root2.659
SRR9715743Root2.492

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.118
SRR8749028MeJA induced 9h0.056
SRR8749029MeJA induced 9h0.080
SRR8749030Uninduced0.035
SRR8749031Uninduced0.000
SRR8749032Uninduced0.031

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.452
SRR8400027Control-Root1.557

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved