Gene detail information of Glyur000130s00006902.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01590.28.00E-122Galactose mutarotase-like superfamily protein
NRKEH24766.10aldose 1-epimerase family protein [Medicago truncatula]
COGYP_002355684.11.00E-47aldose 1-epimerase [Thauera sp. MZ1T]
Swissprottr|Q40784|AAPC_CENCI2.00E-119Putative glucose-6-phosphate 1-epimerase
trEMBLtr|A0A072U5Z2|A0A072U5Z2_MEDTR0Aldose 1-epimerase family protein {ECO:0000313|EMBL:KEH24766.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00130122246127393-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01792E5.1.3.15 EC:5.1.3.15 Glycolysis / Gluconeogenesis map00010


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000130s00006902.1PF01263.15Aldose_epim643342.80E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.703
SRR1783600control24.638
SRR1783602moderate drought stress29.680
SRR1811619moderate drought stress29.235

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.530
DRR006520Root Summer glycyrrhizin high producing strain36.403
DRR006521Root Winter glycyrrhizin high producing strain7.525
DRR006522Root Winter glycyrrhizin high producing strain7.806
DRR006523Root Summer glycyrrhizin low producing strain51.791
DRR006524Root Summer glycyrrhizin low producing strain53.743
DRR006525Leaf Summer glycyrrhizin high producing strain0.586
DRR006526Leaf Summer glycyrrhizin high producing strain0.624

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.718
SRR2868004Drought Stress(Tissue:root)1.344
SRR2967015Control (Tissue:root)2.686

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.245
SRR9715740Leave0.614
SRR9715741Leave0.804
SRR9715739Root7.186
SRR9715742Root14.100
SRR9715743Root15.613

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.316
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.401
SRR8749030Uninduced0.246
SRR8749031Uninduced0.274
SRR8749032Uninduced0.443

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.186
SRR8400027Control-Root0.331

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved