Gene detail information of Glyur000130s00006910.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G47750.10D6 protein kinase like 2
NRXP_003554867.10PREDICTED: protein kinase PVPK-1-like isoform X1 [Glycine max]
COGYP_004178129.11.00E-18serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Swissprottr|P15792|KPK1_PHAVU0Protein kinase PVPK-1
trEMBLtr|I1N5J7|I1N5J7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G00540.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00130160516164249-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000130s00006910.1PF00069.20Pkinase2423915.00E-36
Glyur000130s00006910.1PF00069.20Pkinase4715786.30E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.166
SRR1783600control11.255
SRR1783602moderate drought stress13.423
SRR1811619moderate drought stress12.688

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.519
DRR006520Root Summer glycyrrhizin high producing strain12.453
DRR006521Root Winter glycyrrhizin high producing strain1.711
DRR006522Root Winter glycyrrhizin high producing strain1.791
DRR006523Root Summer glycyrrhizin low producing strain3.268
DRR006524Root Summer glycyrrhizin low producing strain3.218
DRR006525Leaf Summer glycyrrhizin high producing strain7.224
DRR006526Leaf Summer glycyrrhizin high producing strain7.227

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.131
SRR2868004Drought Stress(Tissue:root)8.903
SRR2967015Control (Tissue:root)9.333

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.688
SRR9715740Leave5.453
SRR9715741Leave1.826
SRR9715739Root11.741
SRR9715742Root19.282
SRR9715743Root17.854

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.408
SRR8749028MeJA induced 9h2.236
SRR8749029MeJA induced 9h0.681
SRR8749030Uninduced0.694
SRR8749031Uninduced1.911
SRR8749032Uninduced0.484

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.089
SRR8400027Control-Root23.611

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved