Gene detail information of Glyur000130s00006931.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G40440.10mitogen-activated protein kinase kinase 3
NRXP_003524547.10PREDICTED: dual specificity mitogen-activated protein kinase kinase 1-like [Glycine max]
COGYP_643511.16.00E-23serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|O80396|M2K3_ARATH0Mitogen-activated protein kinase kinase 3
trEMBLtr|I1K1I0|I1K1I0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G08720.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00130311866316508+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K20607MKK3 EC:2.7.12.2 MAPK signaling pathway - plant map04016
Fluid shear stress and atherosclerosismap05418


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000130s00006931.2PF00069.20Pkinase873401.10E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.887
SRR1783600control14.064
SRR1783602moderate drought stress10.933
SRR1811619moderate drought stress11.069

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.340
DRR006520Root Summer glycyrrhizin high producing strain14.913
DRR006521Root Winter glycyrrhizin high producing strain13.207
DRR006522Root Winter glycyrrhizin high producing strain12.534
DRR006523Root Summer glycyrrhizin low producing strain19.128
DRR006524Root Summer glycyrrhizin low producing strain19.236
DRR006525Leaf Summer glycyrrhizin high producing strain8.498
DRR006526Leaf Summer glycyrrhizin high producing strain8.596

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.686
SRR2868004Drought Stress(Tissue:root)23.447
SRR2967015Control (Tissue:root)20.623

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.808
SRR9715740Leave11.100
SRR9715741Leave9.671
SRR9715739Root4.008
SRR9715742Root9.238
SRR9715743Root10.896

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.251
SRR8749028MeJA induced 9h10.574
SRR8749029MeJA induced 9h6.960
SRR8749030Uninduced9.747
SRR8749031Uninduced5.416
SRR8749032Uninduced5.343

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.334
SRR8400027Control-Root31.963

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved