Gene detail information of Glyur000132s00015932.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G01890.10Leucine-rich receptor-like protein kinase family protein
NRXP_003533657.20PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max]
COGYP_004775215.18.00E-54RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9LRT1|Y3804_ARATH0Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 (Precursor)
trEMBLtr|I1L703|I1L703_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G41110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001326842372662+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000132s00015932.1PF08263.7LRRNT_237767.40E-12
Glyur000132s00015932.1PF00560.28LRR_11061270.12
Glyur000132s00015932.1PF13855.1LRR_81311902.40E-09
Glyur000132s00015932.1PF00560.28LRR_12042250.037
Glyur000132s00015932.1PF13855.1LRR_83003582.50E-09
Glyur000132s00015932.1PF13855.1LRR_84004592.40E-07
Glyur000132s00015932.1PF13855.1LRR_84725315.10E-09
Glyur000132s00015932.1PF07714.12Pkinase_Tyr6989062.30E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.973
SRR1783600control2.986
SRR1783602moderate drought stress3.085
SRR1811619moderate drought stress3.063

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.171
DRR006520Root Summer glycyrrhizin high producing strain9.001
DRR006521Root Winter glycyrrhizin high producing strain0.826
DRR006522Root Winter glycyrrhizin high producing strain0.752
DRR006523Root Summer glycyrrhizin low producing strain7.523
DRR006524Root Summer glycyrrhizin low producing strain7.478
DRR006525Leaf Summer glycyrrhizin high producing strain1.696
DRR006526Leaf Summer glycyrrhizin high producing strain1.599

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.575
SRR2868004Drought Stress(Tissue:root)6.880
SRR2967015Control (Tissue:root)7.973

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.898
SRR9715740Leave1.336
SRR9715741Leave1.244
SRR9715739Root2.036
SRR9715742Root7.862
SRR9715743Root6.042

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.293
SRR8749028MeJA induced 9h1.778
SRR8749029MeJA induced 9h1.345
SRR8749030Uninduced1.725
SRR8749031Uninduced2.919
SRR8749032Uninduced1.763

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.180
SRR8400027Control-Root7.650

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved