Gene detail information of Glyur000132s00015947.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G01850.15.00E-151Protein kinase superfamily protein
NRAFK44948.10unknown [Medicago truncatula]
COGYP_001958461.12.00E-35hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-77Serine/threonine-protein kinase HT1
trEMBLtr|I3SXF6|I3SXF6_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK44948.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00132133759138341-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000132s00015947.1PF07714.12Pkinase_Tyr483073.70E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.481
SRR1783600control6.596
SRR1783602moderate drought stress8.525
SRR1811619moderate drought stress8.398

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.362
DRR006520Root Summer glycyrrhizin high producing strain14.519
DRR006521Root Winter glycyrrhizin high producing strain12.217
DRR006522Root Winter glycyrrhizin high producing strain11.950
DRR006523Root Summer glycyrrhizin low producing strain12.042
DRR006524Root Summer glycyrrhizin low producing strain11.497
DRR006525Leaf Summer glycyrrhizin high producing strain12.075
DRR006526Leaf Summer glycyrrhizin high producing strain11.905

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.053
SRR2868004Drought Stress(Tissue:root)25.384
SRR2967015Control (Tissue:root)31.917

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.432
SRR9715740Leave32.276
SRR9715741Leave42.747
SRR9715739Root4.023
SRR9715742Root14.133
SRR9715743Root12.637

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.516
SRR8749028MeJA induced 9h11.197
SRR8749029MeJA induced 9h7.913
SRR8749030Uninduced10.690
SRR8749031Uninduced6.371
SRR8749032Uninduced5.474

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.386
SRR8400027Control-Root14.183

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved