Gene detail information of Glyur000132s00015958.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06920.1 | 2.00E-28 | ovate family protein 4 |
| NR | XP_003551614.1 | 3.82E-156 | PREDICTED: uncharacterized protein LOC100794572 [Glycine max] |
| Swissprot | tr|F4HNU8|OFP4_ARATH | 7.00E-40 | Transcription repressor OFP4 |
| trEMBL | tr|I1N3A2|I1N3A2_SOYBN | 1.00E-156 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G44780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00132 | 207919 | 209109 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000132s00015958.1 | PF13724.1 | DNA_binding_2 | 1 | 46 | 1.00E-18 |
| Glyur000132s00015958.1 | PF04844.8 | Ovate | 335 | 392 | 1.10E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 59.976 |
| SRR1783600 | control | 59.861 |
| SRR1783602 | moderate drought stress | 31.481 |
| SRR1811619 | moderate drought stress | 30.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.654 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.567 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.219 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.345 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.696 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.856 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.979 |
| SRR2967015 | Control (Tissue:root) | 7.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.860 |
| SRR9715740 | Leave | 0.779 |
| SRR9715741 | Leave | 1.208 |
| SRR9715739 | Root | 0.932 |
| SRR9715742 | Root | 1.654 |
| SRR9715743 | Root | 1.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.304 |
| SRR8749028 | MeJA induced 9h | 0.700 |
| SRR8749029 | MeJA induced 9h | 0.130 |
| SRR8749030 | Uninduced | 0.214 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 55.208 |
| SRR8400027 | Control-Root | 70.212 |