Gene detail information of Glyur000132s00015971.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58380.16.00E-158SOS3-interacting protein 1
NRXP_003552306.10PREDICTED: CBL-interacting protein kinase 2-like [Glycine max]
COGYP_004981777.15.00E-34Serine/threonine protein kinase with PASTA sensors [Geobacillus thermoleovorans CCB_US3_UF5]
Swissprottr|Q9C562|CIPKA_ARATH0CBL-interacting serine/threonine-protein kinase 10
trEMBLtr|I1N370|I1N370_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G44450.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00132274658277771-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000132s00015971.1PF00069.20Pkinase1013558.20E-75
Glyur000132s00015971.1PF03822.9NAF3994588.40E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.127
SRR1783600control6.147
SRR1783602moderate drought stress7.265
SRR1811619moderate drought stress7.215

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.116
DRR006520Root Summer glycyrrhizin high producing strain30.548
DRR006521Root Winter glycyrrhizin high producing strain166.567
DRR006522Root Winter glycyrrhizin high producing strain161.636
DRR006523Root Summer glycyrrhizin low producing strain49.676
DRR006524Root Summer glycyrrhizin low producing strain49.419
DRR006525Leaf Summer glycyrrhizin high producing strain8.809
DRR006526Leaf Summer glycyrrhizin high producing strain8.995

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.812
SRR2868004Drought Stress(Tissue:root)56.524
SRR2967015Control (Tissue:root)132.512

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave77.148
SRR9715740Leave68.627
SRR9715741Leave64.873
SRR9715739Root14.448
SRR9715742Root49.899
SRR9715743Root46.979

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h160.433
SRR8749028MeJA induced 9h184.153
SRR8749029MeJA induced 9h223.599
SRR8749030Uninduced179.300
SRR8749031Uninduced184.678
SRR8749032Uninduced207.234

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.691
SRR8400027Control-Root21.341

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved