Gene detail information of Glyur000133s00010359.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33360.17.00E-129NAD(P)-binding Rossmann-fold superfamily protein
NRXP_003603023.10Dihydroflavonol-4-reductase [Medicago truncatula]
COGYP_004682334.16.00E-56glycosyl transferase family protein [Cupriavidus necator N-1]
Swissprottr|Q40316|VESTR_MEDSA1.00E-19Vestitone reductase
trEMBLtr|G7J6B7|G7J6B7_MEDTR0NAD(P)-binding rossmann-fold protein {ECO:0000313|EMBL:AES73274.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001335877160621+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15891FLDH EC:1.1.1.354 Terpenoid backbone biosynthesis map00900
Sesquiterpenoid and triterpenoid biosynthesismap00909


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0050662  coenzyme binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000133s00010359.1PF01370.16Epimerase41681.40E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.141
SRR1783600control27.488
SRR1783602moderate drought stress23.738
SRR1811619moderate drought stress23.178

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.540
DRR006520Root Summer glycyrrhizin high producing strain21.615
DRR006521Root Winter glycyrrhizin high producing strain12.741
DRR006522Root Winter glycyrrhizin high producing strain12.682
DRR006523Root Summer glycyrrhizin low producing strain18.450
DRR006524Root Summer glycyrrhizin low producing strain18.573
DRR006525Leaf Summer glycyrrhizin high producing strain9.523
DRR006526Leaf Summer glycyrrhizin high producing strain9.585

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.579
SRR2868004Drought Stress(Tissue:root)37.546
SRR2967015Control (Tissue:root)37.115

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.584
SRR9715740Leave11.468
SRR9715741Leave11.759
SRR9715739Root23.888
SRR9715742Root21.248
SRR9715743Root20.344

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.102
SRR8749028MeJA induced 9h14.839
SRR8749029MeJA induced 9h9.030
SRR8749030Uninduced7.705
SRR8749031Uninduced2.392
SRR8749032Uninduced2.771

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.018
SRR8400027Control-Root28.698

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved