Gene detail information of Glyur000133s00010360.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42700.1 | 2.00E-52 | AP2/B3-like transcriptional factor family protein |
| NR | XP_003523918.1 | 4.87E-130 | PREDICTED: B3 domain-containing protein At5g42700-like [Glycine max] |
| Swissprot | tr|Q9FMZ4|Y5270_ARATH | 7.00E-79 | B3 domain-containing protein At5g42700 |
| trEMBL | tr|I1JTI3|I1JTI3_SOYBN | 2.00E-130 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G04030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00133 | 63017 | 67931 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000133s00010360.1 | PF02362.16 | B3 | 129 | 218 | 3.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.871 |
| SRR1783600 | control | 1.797 |
| SRR1783602 | moderate drought stress | 0.919 |
| SRR1811619 | moderate drought stress | 0.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.109 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.807 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.378 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.379 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.195 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.559 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.662 |
| SRR2967015 | Control (Tissue:root) | 6.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.700 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.267 |
| SRR9715739 | Root | 1.605 |
| SRR9715742 | Root | 1.216 |
| SRR9715743 | Root | 1.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.419 |
| SRR8749028 | MeJA induced 9h | 9.877 |
| SRR8749029 | MeJA induced 9h | 18.227 |
| SRR8749030 | Uninduced | 0.090 |
| SRR8749031 | Uninduced | 0.042 |
| SRR8749032 | Uninduced | 1.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.963 |
| SRR8400027 | Control-Root | 3.585 |