Gene detail information of Glyur000133s00010387.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G46264.1 | 2.00E-84 | heat shock transcription factor B4 |
| NR | XP_004501560.1 | 0 | PREDICTED: heat stress transcription factor B-4-like [Cicer arietinum] |
| Swissprot | tr|Q9C635|HSFB4_ARATH | 2.00E-114 | Heat stress transcription factor B-4 |
| trEMBL | tr|G7J6F2|G7J6F2_MEDTR | 0 | Heat shock transcription factor {ECO:0000313|EMBL:AES73309.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00133 | 211047 | 212675 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HSF |
| EAR motif-containing Proteins | HSF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000133s00010387.1 | PF00447.12 | HSF_DNA-bind | 25 | 117 | 2.20E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.315 |
| SRR1783600 | control | 19.341 |
| SRR1783602 | moderate drought stress | 19.306 |
| SRR1811619 | moderate drought stress | 19.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.070 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.957 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.146 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.143 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.100 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.645 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.225 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.834 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.607 |
| SRR2967015 | Control (Tissue:root) | 7.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.296 |
| SRR9715740 | Leave | 0.209 |
| SRR9715741 | Leave | 0.280 |
| SRR9715739 | Root | 3.503 |
| SRR9715742 | Root | 4.700 |
| SRR9715743 | Root | 6.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.116 |
| SRR8400027 | Control-Root | 12.728 |