Gene detail information of Glyur000133s00010400.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT4G31170.3 | 2.00E-180 | Protein kinase superfamily protein |
NR | XP_007160207.1 | 0 | hypothetical protein PHAVU_002G301900g [Phaseolus vulgaris] |
COG | YP_001958461.1 | 1.00E-35 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
Swissprot | tr|Q2MHE4|HT1_ARATH | 3.00E-99 | Serine/threonine-protein kinase HT1 |
trEMBL | tr|V7CTI9|V7CTI9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW32201.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00133 | 294591 | 299030 | + |
Gene family
Gene family | subfamily |
---|---|
Protein Kinases Family | PPC:2.1.4 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000133s00010400.1 | PF07714.12 | Pkinase_Tyr | 135 | 388 | 6.20E-66 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 88.343 |
SRR1783600 | control | 88.896 |
SRR1783602 | moderate drought stress | 96.335 |
SRR1811619 | moderate drought stress | 96.272 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 122.535 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 120.763 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 133.737 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 130.413 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 130.988 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 130.796 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 52.931 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.012 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 111.807 |
SRR2868004 | Drought Stress(Tissue:root) | 127.931 |
SRR2967015 | Control (Tissue:root) | 128.658 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 105.079 |
SRR9715740 | Leave | 105.149 |
SRR9715741 | Leave | 130.766 |
SRR9715739 | Root | 81.819 |
SRR9715742 | Root | 123.731 |
SRR9715743 | Root | 115.259 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 130.855 |
SRR8749028 | MeJA induced 9h | 107.636 |
SRR8749029 | MeJA induced 9h | 133.538 |
SRR8749030 | Uninduced | 111.544 |
SRR8749031 | Uninduced | 144.680 |
SRR8749032 | Uninduced | 126.441 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 99.229 |
SRR8400027 | Control-Root | 97.753 |