Gene detail information of Glyur000134s00009747.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G66530.22.00E-130Galactose mutarotase-like superfamily protein
NRXP_004512056.10PREDICTED: putative glucose-6-phosphate 1-epimerase-like [Cicer arietinum]
COGYP_004754755.14.00E-39aldose 1-epimerase [Collimonas fungivorans Ter331]
Swissprottr|Q40784|AAPC_CENCI2.00E-36Putative glucose-6-phosphate 1-epimerase
trEMBLtr|I3SYV6|I3SYV6_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK45448.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001342095926112+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01792E5.1.3.15 EC:5.1.3.15 Glycolysis / Gluconeogenesis map00010


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000134s00009747.2PF01263.15Aldose_epim533101.10E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.939
SRR1783600control10.919
SRR1783602moderate drought stress13.834
SRR1811619moderate drought stress13.790

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.492
DRR006520Root Summer glycyrrhizin high producing strain9.287
DRR006521Root Winter glycyrrhizin high producing strain4.401
DRR006522Root Winter glycyrrhizin high producing strain4.247
DRR006523Root Summer glycyrrhizin low producing strain9.144
DRR006524Root Summer glycyrrhizin low producing strain8.972
DRR006525Leaf Summer glycyrrhizin high producing strain60.308
DRR006526Leaf Summer glycyrrhizin high producing strain60.426

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.662
SRR2868004Drought Stress(Tissue:root)12.981
SRR2967015Control (Tissue:root)11.405

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave49.099
SRR9715740Leave74.564
SRR9715741Leave37.704
SRR9715739Root5.101
SRR9715742Root6.238
SRR9715743Root4.830

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.041
SRR8749028MeJA induced 9h8.477
SRR8749029MeJA induced 9h8.779
SRR8749030Uninduced7.967
SRR8749031Uninduced6.105
SRR8749032Uninduced5.557

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.824
SRR8400027Control-Root32.799

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved