Gene detail information of Glyur000134s00009758.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G53620.13.00E-70pyrophosphorylase 4
NRXP_003612057.11.06E-102Soluble inorganic pyrophosphatase [Medicago truncatula]
COGYP_003572090.16.00E-40inorganic pyrophosphatase [Salinibacter ruber M8]
Swissprottr|O48556|IPYR_MAIZE1.00E-87Soluble inorganic pyrophosphatase
trEMBLtr|G7KEZ6|G7KEZ6_MEDTR5.00E-102Soluble inorganic pyrophosphatase {ECO:0000313|EMBL:AES95016.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001347775681795+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01507ppa EC:3.6.1.1 Oxidative phosphorylation map00190


Gene Ontology

biological_process

GO:0006796  phosphate-containing compound metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0000287  magnesium ion binding

GO:0004427  inorganic diphosphatase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000134s00009758.1PF00719.14Pyrophosphatase501366.70E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.648
SRR1783600control27.873
SRR1783602moderate drought stress24.594
SRR1811619moderate drought stress24.834

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain39.590
DRR006520Root Summer glycyrrhizin high producing strain38.794
DRR006521Root Winter glycyrrhizin high producing strain53.428
DRR006522Root Winter glycyrrhizin high producing strain51.372
DRR006523Root Summer glycyrrhizin low producing strain36.230
DRR006524Root Summer glycyrrhizin low producing strain36.520
DRR006525Leaf Summer glycyrrhizin high producing strain40.099
DRR006526Leaf Summer glycyrrhizin high producing strain40.522

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)80.387
SRR2868004Drought Stress(Tissue:root)85.565
SRR2967015Control (Tissue:root)84.921

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave73.657
SRR9715740Leave69.074
SRR9715741Leave91.068
SRR9715739Root34.195
SRR9715742Root38.295
SRR9715743Root36.046

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.130
SRR8749028MeJA induced 9h26.292
SRR8749029MeJA induced 9h22.911
SRR8749030Uninduced33.533
SRR8749031Uninduced26.634
SRR8749032Uninduced23.679

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.540
SRR8400027Control-Root61.622

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved