Gene detail information of Glyur000134s00009786.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36360.10beta-galactosidase 3
NRXP_004512085.10PREDICTED: beta-galactosidase 3-like [Cicer arietinum]
COGYP_003380010.13.00E-56beta-galactosidase [Kribbella flavida DSM 17836]
Swissprottr|Q9SCV9|BGAL3_ARATH0Beta-galactosidase 3 (Precursor)
trEMBLtr|K7K4B2|K7K4B2_SOYBN0Beta-galactosidase {ECO:0000256|RuleBase:RU000675}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00134252583258189-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH35


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000134s00009786.1PF01301.14Glyco_hydro_35363403.20E-121
Glyur000134s00009786.1PF02140.13Gal_Lectin7668438.20E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.325
SRR1783600control24.428
SRR1783602moderate drought stress14.297
SRR1811619moderate drought stress14.218

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.905
DRR006520Root Summer glycyrrhizin high producing strain19.749
DRR006521Root Winter glycyrrhizin high producing strain0.332
DRR006522Root Winter glycyrrhizin high producing strain0.365
DRR006523Root Summer glycyrrhizin low producing strain9.039
DRR006524Root Summer glycyrrhizin low producing strain9.089
DRR006525Leaf Summer glycyrrhizin high producing strain3.476
DRR006526Leaf Summer glycyrrhizin high producing strain3.410

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)69.943
SRR2868004Drought Stress(Tissue:root)32.469
SRR2967015Control (Tissue:root)32.989

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.267
SRR9715740Leave1.363
SRR9715741Leave2.331
SRR9715739Root15.104
SRR9715742Root18.890
SRR9715743Root18.781

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.522
SRR8749028MeJA induced 9h36.483
SRR8749029MeJA induced 9h16.159
SRR8749030Uninduced10.635
SRR8749031Uninduced2.347
SRR8749032Uninduced1.476

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root63.201
SRR8400027Control-Root78.042