Gene detail information of Glyur000135s00007293.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42250.19.00E-63Zinc-binding alcohol dehydrogenase family protein
NRXP_003519482.13.24E-99PREDICTED: alcohol dehydrogenase-like 7-like isoform X1 [Glycine max]
COGYP_008046593.13.00E-31alcohol dehydrogenase GroES-like protein [Spiribacter salinus M19-40]
Swissprottr|Q9FH04|ADHL7_ARATH1.00E-75Alcohol dehydrogenase-like 7
trEMBLtr|I1JIQ4|I1JIQ4_SOYBN1.00E-99Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G44170.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001358721089641+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00121frmA, ADH5, adhC EC:1.1.1.284 1.1.1.1 Carbon metabolism map01200
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000135s00007293.1PF00107.21ADH_zinc_N601782.00E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.100
SRR1783600control2.857
SRR1783602moderate drought stress1.960
SRR1811619moderate drought stress2.124

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.460
DRR006520Root Summer glycyrrhizin high producing strain1.298
DRR006521Root Winter glycyrrhizin high producing strain0.042
DRR006522Root Winter glycyrrhizin high producing strain0.064
DRR006523Root Summer glycyrrhizin low producing strain0.720
DRR006524Root Summer glycyrrhizin low producing strain1.037
DRR006525Leaf Summer glycyrrhizin high producing strain18.115
DRR006526Leaf Summer glycyrrhizin high producing strain17.306

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.316
SRR2868004Drought Stress(Tissue:root)52.356
SRR2967015Control (Tissue:root)42.939

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.892
SRR9715740Leave0.902
SRR9715741Leave2.535
SRR9715739Root7.137
SRR9715742Root7.162
SRR9715743Root7.622

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.213
SRR8749028MeJA induced 9h0.266
SRR8749029MeJA induced 9h0.327
SRR8749030Uninduced1.189
SRR8749031Uninduced1.126
SRR8749032Uninduced1.894

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.295
SRR8400027Control-Root17.952

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved