Gene detail information of Glyur000135s00007306.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03740.14.00E-160BTB-POZ and MATH domain 4
NRXP_004491160.10PREDICTED: BTB/POZ and MATH domain-containing protein 4-like isoform X2 [Cicer arietinum]
Swissprottr|Q9SRV1|BPM4_ARATH0BTB/POZ and MATH domain-containing protein 4
trEMBLtr|K7KB30|K7KB30_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G44046.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00135156688161029-


Gene family

Gene familysubfamily
Ubiquitin FamilyBTB
Ubiquitin Family3-box


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000135s00007306.1PF00917.21MATH1452623.10E-08
Glyur000135s00007306.1PF00651.26BTB2914082.70E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.934
SRR1783600control9.926
SRR1783602moderate drought stress9.634
SRR1811619moderate drought stress9.758

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.434
DRR006520Root Summer glycyrrhizin high producing strain11.281
DRR006521Root Winter glycyrrhizin high producing strain14.485
DRR006522Root Winter glycyrrhizin high producing strain14.065
DRR006523Root Summer glycyrrhizin low producing strain13.479
DRR006524Root Summer glycyrrhizin low producing strain13.430
DRR006525Leaf Summer glycyrrhizin high producing strain6.755
DRR006526Leaf Summer glycyrrhizin high producing strain6.754

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.166
SRR2868004Drought Stress(Tissue:root)16.127
SRR2967015Control (Tissue:root)17.168

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.565
SRR9715740Leave11.445
SRR9715741Leave11.168
SRR9715739Root10.081
SRR9715742Root13.417
SRR9715743Root11.021

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.486
SRR8749028MeJA induced 9h31.706
SRR8749029MeJA induced 9h27.665
SRR8749030Uninduced20.014
SRR8749031Uninduced31.406
SRR8749032Uninduced25.249

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.926
SRR8400027Control-Root13.059