Gene detail information of Glyur000135s00007312.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G27150.20abscisic aldehyde oxidase 3
NRXP_004491149.10PREDICTED: abscisic-aldehyde oxidase-like [Cicer arietinum]
COGYP_007200397.11.00E-145xanthine dehydrogenase, molybdopterin-binding subunit B [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q7G192|ALDO2_ARATH0Indole-3-acetaldehyde oxidase
trEMBLtr|K7KB27|K7KB27_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G43993.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00135201697220915+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09842AAO3 EC:1.2.3.14 Carotenoid biosynthesis map00906


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0009055  electron carrier activity

GO:0016491  oxidoreductase activity

GO:0016614  oxidoreductase activity, acting on CH-OH group of donors

GO:0046872  metal ion binding

GO:0050660  flavin adenine dinucleotide binding

GO:0051536  iron-sulfur cluster binding

GO:0051537  2 iron, 2 sulfur cluster binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000135s00007312.1PF00111.22Fer222872.30E-06
Glyur000135s00007312.1PF01799.15Fer2_2991866.90E-16
Glyur000135s00007312.1PF00941.16FAD_binding_52464259.30E-35
Glyur000135s00007312.1PF03450.12CO_deh_flav_C4465541.40E-16
Glyur000135s00007312.1PF01315.17Ald_Xan_dh_C6287351.90E-26
Glyur000135s00007312.1PF02738.13Ald_Xan_dh_C274912824.90E-172
Glyur000135s00007312.1PF01799.15Fer2_2142215078.20E-19
Glyur000135s00007312.1PF00941.16FAD_binding_5156717461.00E-37
Glyur000135s00007312.1PF03450.12CO_deh_flav_C176418691.30E-15
Glyur000135s00007312.1PF01315.17Ald_Xan_dh_C194320524.30E-27
Glyur000135s00007312.1PF02738.13Ald_Xan_dh_C2206626026.10E-182


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.357
SRR1783600control12.579
SRR1783602moderate drought stress13.771
SRR1811619moderate drought stress13.140

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.741
DRR006520Root Summer glycyrrhizin high producing strain5.679
DRR006521Root Winter glycyrrhizin high producing strain3.101
DRR006522Root Winter glycyrrhizin high producing strain3.101
DRR006523Root Summer glycyrrhizin low producing strain4.430
DRR006524Root Summer glycyrrhizin low producing strain4.095
DRR006525Leaf Summer glycyrrhizin high producing strain5.118
DRR006526Leaf Summer glycyrrhizin high producing strain5.042

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.416
SRR2868004Drought Stress(Tissue:root)13.772
SRR2967015Control (Tissue:root)14.748

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.789
SRR9715740Leave14.274
SRR9715741Leave16.338
SRR9715739Root2.327
SRR9715742Root18.405
SRR9715743Root15.418

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.886
SRR8749028MeJA induced 9h5.709
SRR8749029MeJA induced 9h1.951
SRR8749030Uninduced4.522
SRR8749031Uninduced2.854
SRR8749032Uninduced1.748

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.895
SRR8400027Control-Root17.440

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved