Gene detail information of Glyur000135s00007315.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G73080.10PEP1 receptor 1
NRAET00007.20LRR receptor-like kinase [Medicago truncatula]
COGYP_004775215.16.00E-56RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|P93194|RPK1_IPONI0Receptor-like protein kinase (Precursor)
trEMBLtr|G7KHF5|G7KHF5_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AET00007.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00135224980229451+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000135s00007315.1PF08263.7LRRNT_236716.40E-06
Glyur000135s00007315.1PF00560.28LRR_11241450.026
Glyur000135s00007315.1PF00560.28LRR_11962170.52
Glyur000135s00007315.1PF12799.2LRR_43614002.80E-07
Glyur000135s00007315.1PF00560.28LRR_14104320.49
Glyur000135s00007315.1PF00069.20Pkinase7039191.60E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.317
SRR1783600control1.361
SRR1783602moderate drought stress0.785
SRR1811619moderate drought stress0.876

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.238
DRR006520Root Summer glycyrrhizin high producing strain5.165
DRR006521Root Winter glycyrrhizin high producing strain0.187
DRR006522Root Winter glycyrrhizin high producing strain0.204
DRR006523Root Summer glycyrrhizin low producing strain4.083
DRR006524Root Summer glycyrrhizin low producing strain4.089
DRR006525Leaf Summer glycyrrhizin high producing strain1.447
DRR006526Leaf Summer glycyrrhizin high producing strain1.425

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.594
SRR2868004Drought Stress(Tissue:root)0.868
SRR2967015Control (Tissue:root)1.001

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.976
SRR9715740Leave1.801
SRR9715741Leave3.401
SRR9715739Root0.506
SRR9715742Root1.942
SRR9715743Root1.842

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.174
SRR8749028MeJA induced 9h3.900
SRR8749029MeJA induced 9h3.470
SRR8749030Uninduced3.096
SRR8749031Uninduced0.773
SRR8749032Uninduced1.553

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.876
SRR8400027Control-Root2.023

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved