Gene detail information of Glyur000136s00007905.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10160.1 | 5.00E-76 | Thioesterase superfamily protein |
| NR | KHN33515.1 | 6.68E-133 | (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Glycine soja] |
| COG | YP_007141585.1 | 5.00E-46 | 3-hydroxyacyl-(acyl-carrier-protein) dehydratase [Crinalium epipsammum PCC 9333] |
| trEMBL | tr|I1MDV8|I1MDV8_SOYBN | 6.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G05800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 40223 | 44618 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K02372 | fabZ | EC:4.2.1.59 | Fatty acid metabolism | map01212 |
| Fatty acid biosynthesis | map00061 | |||
| Biotin metabolism | map00780 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000136s00007905.1 | PF07977.8 | FabA | 94 | 219 | 2.00E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.774 |
| SRR1783600 | control | 22.027 |
| SRR1783602 | moderate drought stress | 10.003 |
| SRR1811619 | moderate drought stress | 9.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.389 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.186 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.299 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.342 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.813 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.813 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 156.971 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 145.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.251 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.012 |
| SRR2967015 | Control (Tissue:root) | 7.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 181.883 |
| SRR9715740 | Leave | 148.468 |
| SRR9715741 | Leave | 136.339 |
| SRR9715739 | Root | 6.308 |
| SRR9715742 | Root | 5.728 |
| SRR9715743 | Root | 5.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.613 |
| SRR8749028 | MeJA induced 9h | 5.804 |
| SRR8749029 | MeJA induced 9h | 3.788 |
| SRR8749030 | Uninduced | 3.587 |
| SRR8749031 | Uninduced | 0.753 |
| SRR8749032 | Uninduced | 2.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.768 |
| SRR8400027 | Control-Root | 12.003 |