Gene detail information of Glyur000136s00007907.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G39580.13.00E-114Peroxidase superfamily protein
NRAFK37171.10unknown [Lotus japonicus]
Swissprottr|P22196|PER2_ARAHY0Cationic peroxidase 2 (Precursor)
trEMBLtr|I3SA79|I3SA79_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK37171.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001364706350597-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000136s00007907.1PF00141.18peroxidase442832.00E-79


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.063
SRR1783600control0.063
SRR1783602moderate drought stress0.066
SRR1811619moderate drought stress0.066

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.093
DRR006520Root Summer glycyrrhizin high producing strain0.092
DRR006521Root Winter glycyrrhizin high producing strain57.954
DRR006522Root Winter glycyrrhizin high producing strain55.874
DRR006523Root Summer glycyrrhizin low producing strain0.685
DRR006524Root Summer glycyrrhizin low producing strain0.808
DRR006525Leaf Summer glycyrrhizin high producing strain0.762
DRR006526Leaf Summer glycyrrhizin high producing strain0.796

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.379
SRR2868004Drought Stress(Tissue:root)2.986
SRR2967015Control (Tissue:root)2.577

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.775
SRR9715740Leave1.798
SRR9715741Leave11.851
SRR9715739Root0.591
SRR9715742Root3.415
SRR9715743Root2.844

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h71.894
SRR8749028MeJA induced 9h243.473
SRR8749029MeJA induced 9h118.514
SRR8749030Uninduced184.624
SRR8749031Uninduced105.631
SRR8749032Uninduced125.161

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.554
SRR8400027Control-Root4.040

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved