Gene detail information of Glyur000136s00007909.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26730.1 | 1.00E-66 | Leucine-rich repeat protein kinase family protein |
| NR | XP_004486244.1 | 0 | PREDICTED: probable inactive receptor kinase At2g26730-like [Cicer arietinum] |
| COG | YP_004644296.1 | 1.00E-11 | serine/threonine protein kinase with PASTA sensor(s) [Paenibacillus mucilaginosus KNP414] |
| Swissprot | tr|C0LGR9|Y4312_ARATH | 9.00E-89 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 (Precursor) |
| trEMBL | tr|G7INV2|G7INV2_MEDTR | 0 | Receptor-like kinase {ECO:0000313|EMBL:AES63441.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00136 | 64494 | 66672 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.13.3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000136s00007909.1 | PF00069.20 | Pkinase | 256 | 522 | 6.80E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.002 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.281 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.256 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.552 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.090 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.087 |
| SRR2967015 | Control (Tissue:root) | 0.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.117 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.129 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.126 |
| SRR8749028 | MeJA induced 9h | 0.330 |
| SRR8749029 | MeJA induced 9h | 0.148 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.732 |
| SRR8749032 | Uninduced | 0.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.020 |
| SRR8400027 | Control-Root | 0.020 |